A Systems-Level Analysis of Perfect Adaptation in Yeast Osmoregulation

نویسندگان

  • Dale Muzzey
  • Carlos A. Gómez-Uribe
  • Jerome T. Mettetal
  • Alexander van Oudenaarden
چکیده

Negative feedback can serve many different cellular functions, including noise reduction in transcriptional networks and the creation of circadian oscillations. However, only one special type of negative feedback ("integral feedback") ensures perfect adaptation, where steady-state output is independent of steady-state input. Here we quantitatively measure single-cell dynamics in the Saccharomyces cerevisiae hyperosmotic shock network, which regulates membrane turgor pressure. Importantly, we find that the nuclear enrichment of the MAP kinase Hog1 perfectly adapts to changes in external osmolarity, a feature robust to signaling fidelity and operating with very low noise. By monitoring multiple system quantities (e.g., cell volume, Hog1, glycerol) and using varied input waveforms (e.g., steps and ramps), we assess in a minimally invasive manner the network location of the mechanism responsible for perfect adaptation. We conclude that the system contains only one effective integrating mechanism, which requires Hog1 kinase activity and regulates glycerol synthesis but not leakage.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Glycerol as the actuator of integral feedback control in yeast osmotic stress signaling

van Oudenaarden and colleagues employ elegant experiments and control theory to model perfect adaptation of the yeast osmotic stress response – precise return of turgor pressure to its optimal, steady-state value despite variation in system parameters and the continued presence of osmotic stress. Their data convincingly show that nuclear signaling and cell volume undergo “robust perfect adaptat...

متن کامل

Qualitative, semi-quantitative, and quantitative simulation of the osmoregulation system in yeast

In this paper we demonstrate how Morven, a computational framework which can perform qualitative, semi-quantitative, and quantitative simulation of dynamical systems using the same model formalism, is applied to study the osmotic stress response pathway in yeast. First the Morven framework itself is briefly introduced in terms of the model formalism employed and output format. We then built a q...

متن کامل

Analysis of adaptation determinants of domestic rainwater harvesting systems (DRWHs) in Golestan Province, Iran

Most residences of the northern parts of Golestan Province, have historically used rooftop rainwater for drinking. Its adoption rate and continued use have declined in recent years for various reasons. Based on a survey of 380 cases, this research attempted to identify what factors are contributing to the adoption of these systems. The results demonstrated that the adoption changes in response ...

متن کامل

Modelling and Analysis of Feedback Control Mechanisms Underlying Osmoregulation in Yeast

Biological systems display complex dynamics emerging from intricate networks of interacting molecular components: cells use signalling pathways and regulatory control mechanisms to coordinate multiple processes, allowing them to respond and adapt to an ever-changing environment. Many structural and dynamical features of biological control systems can also be found in engineered control systems ...

متن کامل

Osmoregulatory Parameters of Asian sea bass (Lates calcarifer) during adaptation in Freshwater

In the present study, the adaptation of Asian sea bass (lates calcarifer) was investigated in fresh water using physiological parameters of osmoregulation including: the plasma levels of thyroid hormones and cortisol, gill Na+/ K+-ATPase activity and plasma concentrations of sodium and chloride. For this purpose, 60 fish were distributed in three 300 L tanks with a density of 20 fish per tank. ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Cell

دوره 138  شماره 

صفحات  -

تاریخ انتشار 2009